Publications

Pelizzola, M., Laursen, R. & Hobolth, A. (2023). Model selection and robust inference of mutational signatures using Negative Binomial non-negative matrix factorization. BMC Bioinformatics, 24(1), Article 187. https://doi.org/10.1186/s12859-023-05304-1

Pelizzola, M., Tanderup, K., Chopra, S., Jürgenliemk-Schulz, I. M., Nout, R., Kirchheiner, K. & Spampinato, S. (2023). Co-occurrence of symptoms after radiochemotherapy in locally advanced cervix cancer patients: a cluster analysis. Acta oncologica (Stockholm, Sweden), 62(11), 1479-1487. https://doi.org/10.1080/0284186X.2023.2271252

Pelck, J. S. & Labouriau, R. (2020). Using Multivariate Generalised Linear Mixed Models for Studying Roots Development: An Example Based on Minirhizotron Observations. arXiv. https://arxiv.org/abs/2011.00546

Pelck, J. S., Maia, R. P., Pinheiro, H. P. & Labouriau, R. (2021). A Multivariate Methodology for Analysing Students' Performance Using Register Data. ArXiv.

Peerstrup Ahrendt, L., Labouriau, R., Malmkvist, J., Nicol, C. J. & Christensen, J. W. (2015). Development of a standard test to assess negative reinforcement learning in horses. Applied Animal Behaviour Science, 169, 38-42. https://doi.org/10.1016/j.applanim.2015.05.005

Pedersen, J. (2006). The class of distributions of periodic Ornstein-Uhlenbeck processes driven by Levy processes. Journal of Theoretical Probability, 18, 209-235.

Pedersen, A-M. K. & Jensen, J. L. (2001). A dependent-rates model and an MCMC-based methodology for the maximum-likelihood analysis of sequences with overlapping reading frames. Molecular Biology and Evolution, 18, 763-776. http://mbe.oxfordjournals.org/cgi/content/full/18/5/763

Pedersen, J. (2002). Periodic Ornstein-Uhlenbeck processes driven by Levy processes. Journal of Applied Probability, 39, 748-763.

Pedersen, J. (2003). The Lévy-Itô decomposition of an independently scattered random measure. MaPhySto, University of Aarhus.

Pedersen, J. & Sato, K. (2003). Cone-parameter Convolution Semigroups and their Subordination. Tokyo Journal of Mathematics, 26(2), 503-525.

Pedersen, J. & Sato, K. (2004). Relations between cone-parameter Levy processes and convolution semigroups. J. Math. Soc. Japan, 56(2), 541-559.

Pedersen, J. & Sato, K. (2003). Semigroups and processes with parameter in a cone. MaPhySto, University of Aarhus.

Pedersen, J. & Sato, K. (2003). The class of distributions of periodic Ornstein-Uhlenbeck processes driven by Lévy processes. MaPhySto, University of Aarhus.

Pedersen, U. V., Svendsen, A., Blæsild, P. & Andersen, T. (2002). Lifetime measurement of the metastable B^- ion using an electrostatic ion storage ring. Journal of Physics B: Atomic, Molecular and Optical Physics, 35, 2811.

Pedersen, J. & Sato, K-I. (2004). Semigroups and processes with parameter in a cone. In N. M. Chuong, L. Nirenberg & W. Tutschke (Eds.), Abstract and applied analysis: proceedings of the International Conference held in Hanoi, August 17-21, 2002 (pp. 499-513). World Scientific.

Pedersen, J. & Sauri, O. (2015). On Lévy semistationary processes with a gamma kernel. In R. H. Mena, J. C. Pardo, V. Rivero & G. U. Bravo (Eds.), XI Symposium of Probability and Stochastic Processes: CIMAT, Mexico, November 18-22, 2013 (pp. 217-239). Springer. https://doi.org/10.1007/978-3-319-13984-5_11

Pedersen, J., Nyord, T., Feilberg, A. & Labouriau, R. (2021). Analysis of the effect of air temperature on ammonia emission from band application of slurry. Environmental Pollution, 282, Article 117055. https://doi.org/10.1016/j.envpol.2021.117055

Pedersen, J., Nyord, T., Feilberg, A., Labouriau, R., Hunt, D. & Bittman, S. (2021). Effect of reduced exposed surface area and enhanced infiltration on ammonia emission from untreated and separated cattle slurry. Biosystems Engineering, 211, 141-151. https://doi.org/10.1016/j.biosystemseng.2021.09.003

Pawlas, Z., Nyengaard, J. R. & Jensen, E. B. V. (2009). Particle sizes from sectional data. Biometrics, 65(1), 216-224. https://doi.org/10.1111/j.1541-0420.2008.01019.x

Pawlas, Z. & Jensen, E. B. V. (2006). Further results on variances of local stereological estimators. Image Analysis and Stereology, 25, 155-163. http://www.wise-t.com/ias/article.php?id=193&year=2006&issue=11

Paczkowska, M., Barenboim, J., Sintupisut, N., Fox, N. S., Zhu, H., Abd-Rabbo, D., Mee, M. W., Boutros, P. C., PCAWG Drivers and Functional Interpretation Working Group, Reimand, J. & PCAWG Consortium (2020). Integrative pathway enrichment analysis of multivariate omics data. Nature Communications, 11(1), Article 735. https://doi.org/10.1038/s41467-019-13983-9

Overgaard, M., Parner, E. T. & Pedersen, J. (2017). Asymptotic theory of generalized estimating equations based on jack-knife pseudo-observations. Annals of Statistics, 45(5), 1988-2015. https://doi.org/10.1214/16-AOS1516

Overgaard, M., Parner, E. T. & Pedersen, J. (2018). Estimating the variance in a pseudo-observation scheme with competing risks. Scandinavian Journal of Statistics, 45(4), 923-940. https://doi.org/10.1111/sjos.12328

Overgaard, M., Parner, E. T. & Pedersen, J. (2019). Pseudo-observations under covariate-dependent censoring. Journal of Statistical Planning and Inference, 202(September), 112-122. https://doi.org/10.1016/j.jspi.2019.02.003

Otto, M. & Thäle, C. (2023). Large nearest neighbour balls in hyperbolic stochastic geometry. Extremes, 26(3), 413-431. https://doi.org/10.1007/s10687-023-00470-0

Østergaard, M., Labouriau, R., Dagiliene, E., Ernst, A., Krarup, H., Overvad, K., Autrup, H. & Andersen, V. (2005). A role of multiple drug resistance gene single nucleotide polymorphisms 2677 and 3435 in inflammatory bowel disease? In Proc. Gut, 54 (Suppl VII) (pp. 168)

Østergaard, M., Ernst, A., Labouriau, R. S., Dagiliené, E., Krarup, H. B., Christensen, M., Thorsgaard, N., Jacobsen, B. A., Tage-Jensen, U., Overvad, K., Autrup, H. & Andersen, V. (2009). Cyclooxygenase-2, multidrug resistance 1, and breast cancer resistance protein gene polymorphisms and inflammatory bowel disease in the Danish population. Scandinavian Journal of Gastroenterology, 44(1), 65-73. https://doi.org/10.1080/00365520802400826

Olsen, M. & Andersen, L. N. (2018). Towards Asymptotically Optimal One-to-One PDP Algorithms for Capacity 2+ Vehicles. In Computational Logistics - 9th International Conference, ICCL 2018, Proceedings (pp. 268-278). Springer. https://link.springer.com/chapter/10.1007/978-3-030-00898-7_17

Olsen, M., Andersen, L. N. & Gross, A. (2023). An asymptotically optimal algorithm for online stacking. Mathematical Methods of Operations Research, 97(2), 161-178. https://doi.org/10.1007/s00186-022-00808-7

Ødegård, J., Madsen, P., Labouriau, R. S., Gjerde, B. & Meuwissen, T. H. E. (2011). A sequential threshold cure model for genetic analysis of time-to-event data. Journal of Animal Science, 89, 943-950. https://doi.org/10.2527/jas.2009-2701

Nourdin, I., Peccati, G. & Podolskij, M. (2011). Quantitative Breuer-Major theorems. Stochastic Processes and Their Applications, 121(4), 793-812. https://doi.org/10.1016/j.spa.2010.12.006

Niemann, T., Labouriau, R., Sorensen, H. T., Thorsgaard, N. & Nielsen, T. T. (2003). Association between results of exercise testing and cardiovascular and all-cause mortality, and myocardial infarction: A population-based long-term follow-up study. In Proc. XIX Nordic Congress of Cardiology (pp. 70)

Niemann, T., Labouriau, R., Sorensen, H. T., Thorsgaard, N. & Nielsen, T. T. (2003). Impact on prognosis of regional different referral for coronary angiography after exercise testing: A population-based follow-up study. In Proc. XIX Nordic Congress of Cardiology (pp. 40)

Niemann, T., Labouriau, R., Sørensen, H. T., Thorsgaard, N. & Nielsen, T. T. (2004). Five-year cardiovascular and all-cause mortality, and myocardial infarction in all subjects referred for exercise testing in two Danish counties. Scandinavian Cardiovascular Journal, 38, 137-142. https://doi.org/10.1080/14017430410025774

Niemann, T., Labouriau, R., Sørensen, H. T., Thorsgaard, N. & Nielsen, T. T. (2004). Prognostic impact of different regional referral practice for interventional investigation and coronary treatment after excerse testing: A populationbased 5-year follow-up study. Journal of Internal Medicine, 255(4), 478-485. https://doi.org/10.1111/j.1365-2796.2004.01307.x

Niemann, T., Labouriau, R., Sørensen, H. T., Thorsgaard, N. & Nielsen, T. T. (2004). Prognostic impact of different regional referral practices for interventional investigation and coronary treatment after exercise testing: a population-based 5-year follow-up study. Journal of Internal Medicine, 255(4), 478-485.

Nielsen, V. H., Thirstrup, J. P., Anistoroael, R., Guldbrandtsen, B., Labouriau, R., Christensen, K. & Fredholm, M. (2012). Mapping QTL for Fur Quality Traits in Mink (Neovison vison). Poster session presented at Plant and Animal Genome XX Conference, San Diego, CA, United States.

Nielsen, M. M., Tataru, P., Madsen, T., Hobolth, A. & Pedersen, J. S. (2016). Motif discovery in ranked lists of sequences. (pp. 1-4). http://biorxiv.org/content/biorxiv/suppl/2016/01/11/035956.DC2/035956-1.pdf

Nielsen, S., Simonsen, S. & Hobolth, A. (2016). Inferring Population Genetic Parameters: Particle Filtering, HMM, Ripley’s K-Function or Runs of Homozygosity? In M. Frith & C. Nørgaard Storm Pedersen (Eds.), Algorithms in Bioinformatics - 16th International Workshop, WABI 2016, Proceedings (Vol. 9838, pp. 234-245). Springer. http://link.springer.com/chapter/10.1007/978-3-319-43681-4_19/fulltext.html

Nielsen, M. M., Tataru, P., Madsen, T., Hobolth, A. & Pedersen, J. S. (2018). Regmex: A statistical tool for exploring motifs in ranked sequence lists from genomics experiments. Algorithms for Molecular Biology, 13(1), Article 17. https://doi.org/10.1186/s13015-018-0135-2

Nielsen, M. S. & Pedersen, J. (2019). Limit theorems for quadratic forms and related quantities of discretely sampled continuous-time moving averages. ESAIM: Probability & Statistics, 23, 803-822. https://doi.org/10.1051/ps/2019008

The ICGC/TCGA Pan-Cancer Analysis of Whole Genomes Consortium (2020). Pan-cancer analysis of whole genomes. Nature, 578(7793), 82-93. https://doi.org/10.1038/s41586-020-1969-6

Nielsen, S. K., Carstensen, H. C., Munkholm, L. J., Nørremark, M., Rasmussen, J., Bertl, J., Labouriau, R. & Green, O. (2020). Optimized soil inversion in the headlands with a novel section-controlled mouldboard ploughing system. Soil Use and Management, 36(3), 470-481. https://doi.org/10.1111/sum.12569

Nam, K., Munch, K., Hobolth, A., Y. Dutheil, J., Veeramah, K., Woerner, A., F. Hammer, M., Ape Genome Diversity Project, G., Mailund, T. & H. Schierup, M. (2014). Strong selective sweeps associated with ampliconic regions in great ape X chromosomes. arXiv.

Nam, K., Munch, K., Hobolth, A., Dutheil, J. Y., Veeramah, K. R., Woerner, A. E., Hammer, M. F., Mailund, T., Schierup, M. H. & Great Ape Genome Diversity Project (2015). Extreme selective sweeps independently targeted the X chromosomes of the great apes. Proceedings of the National Academy of Sciences, 112(20). https://doi.org/10.1073/pnas.1419306112

Nairismägi, M-L., Füchtbauer, A., Labouriau, R., Bramsen, J. B. & Füchtbauer, E-M. (2013). The Proto-Oncogene TWIST1 Is Regulated by MicroRNAs. P L o S One, 8(5), e66070. https://doi.org/10.1371/journal.pone.0066070

Myllymäki, M., Mrkvička, T., Grabarnik, P., Seijo, H. & Hahn, U. (2015). Global envelope tests for spatial processes. arXiv.org. http://arxiv.org/abs/1307.0239

Myllymäki, M., Mrkvička, T., Grabarnik, P., Seijo, H. & Hahn, U. (2017). Global Envelope Tests for Spatial Processes. Journal of the Royal Statistical Society, Series B (Statistical Methodology), 79(2), 381-404. https://doi.org/10.1111/rssb.12172

Mühlfeld, C., Papadakis, T., Krasteva, G., Nyengaard, J. R., Hahn, U. & Kummer, W. (2010). An unbiased stereological method for efficiently quantifying the innervation of the heart and other organs based on total length estimations. Journal of Applied Physiology, 108(5), 1402-1409. https://doi.org/10.1152/japplphysiol.01013.2009

Mühlfeld, C., Weibel, E. R., Hahn, U., Kummer, W., Nyengaard, J. R. & Ochs, M. (2010). Is length an appropriate estimator to characterize pulmonary alveolar capillaries? A critical evaluation in the human lung. Anatomical Record, 293(7), 1270-1275. https://doi.org/10.1002/ar.21158

Displaying results 151 to 200 out of 1088

Revised 01.11.2023

Lars Madsen