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Jensen, J. L. (2006). Maximum likelihood classifiers in microarray studies. Institut for Matematiske Fag, Aarhus Universitet. Research Report Vol. 474

Labouriau, R. (2006). Mixture models for survival analysis with a view towards animal genetics applications. In Book of abstracts: CD communication 26-08, 4 pp (pp. 241). WCGALP. http://www.wcgalp8.org.br/wcgalp8/articles/paper/26_717-1039.pdf

Thorarinsdottir, T. L. & Jensen, E. B. V. (2006). Modelling resting state networks in the human brain. In R. Lechnerová, I. Saxl & V. Benes (Eds.), Proceedings S⁴G, International Conference on Stereology, Spatial Statistics and Stochastic Geometry (pp. 137-147). Union Czech Mathematicians and Physicists.

Baudoin, F. & Nualart, D. (2006). Notes on the two-dimensional fractional Brownian motion. Annals of Probability, 34(1), 159-180. https://doi.org/10.1214/009117905000000288

Jónsdóttir, K. Ý., Hoffmann, L., Hobolth, A. & Jensen, E. B. V. (2006). On error prediction in circular systematic sampling. Journal of Microscopy, 222(3), 212-216. https://doi.org/10.1111/j.1365-2818.2006.01589.x

Prokesova, M., Hellmund, G. & Jensen, E. B. V. (2006). On spatio-temporal Lévy based Cox processes. In R. Lechnerová, I. Saxl & V. Benes (Eds.), Proceedings S⁴G, International Conference on Stereology, Spatial Statistics and Stochastic Geometry (pp. 111-116). Union Czech Mathematicians and Physicists.

Asmussen, S., Sheahan, R., Lipsky, L. & Fiorini, P. M. (2006). On the completion time distribution for tasks that must restart from the beginning if failure occurs. Performance Evaluation Review, 34.

Sørensen, K. K., Kirk, H. G., Olsson, K., Labouriau, R. & Christiansen, J. (2006). QTLs for glycoalkaloid content in potato tubers exposed to light. In EAPR- EUCARPIA The Science of Selection: Potato Breeding Methodology for the 21^st Century

Frandsen, J., Hobolth, A., Østergaard, L., Vestergaard-Poulsen, P. & Vedel, E. B. (2006). Regularization of Diffusion Tensor Fields in Axonal Fibre Tracking. Poster session presented at PhD Day 2006, The Faculty of Health Sciences, Aarhus, Denmark.

Barndorff-Nielsen, O. E. & Thorbjørnsen, S. (2006). Regularizing mappings of Lévy measures. Stochastic Processes and Their Applications, 116(3), 423-446. https://doi.org/10.1016/j.spa.2005.09.011

Theil, P. K., Sejrsen, K., Hurley, W. L., Labouriau, R., Thomsen, B. & Sørensen, M. T. (2006). Role of suckling in regulating cell turnover and onset and maintenance of lactation in individual mammary glands of sows. Journal of Animal Science, 84, 1691-1698. https://doi.org/10.2527/jas.2005-518

Asmussen, S. & Albrecher, H. (2006). Ruin probabilities and aggregate claims distributions for shot noise Cox processes. Scand. Art. J., 2006, 86-110.

Klose, A. (2006). Single-Sink Fixed-Charge Transportation: Applications and Exact Solution Algorithms. http://www.imf.au.dk/publs?id=627

Prokesova, M., Hahn, U. & Jensen, E. B. V. (2006). Statistics for locally scaled point processes. In A. Baddeley, P. Gregori, J. Mateu, R. Stoica & D. Stoyan (Eds.), Case Studies in Spatial Point Process Modelling (pp. 99-123). Springer. https://doi.org/10.1007/0-387-31144-0_5

Asmussen, S. & Rojas-Nandayapa, L. (2006). Sums of Dependent Lognormal Random Variables: Asymptotics and Simulation. Thiele Centre, Institut for Matematiske Fag, Aarhus Universitet.

Asmussen, S., Albrecher, H. & Kortschak, D. (2006). Tail asymptotics for sums of dependent risks. Extremes, 9, 107-130.

Pedersen, J. (2006). The class of distributions of periodic Ornstein-Uhlenbeck processes driven by Levy processes. Journal of Theoretical Probability, 18, 209-235.

Gaustadnes, M., Ørntoft, T. F., Jensen, J. L. & Tørring, N. (2006). Validation of the use of DNA pools and primer extension in association studies of sporadic colorectal cancer for selection of candidate SNPs. Human Mutation, 27(2), 187-194.

Kiderlen, M. & Pfrang, A. (2005). Algorithms to estimate the rose of directions of a spatial fibre system. Journal of Microscopy, 219(2), 50-60.

Andersen, L. D., Zieger, K., Kruhøffer, M., Andersen, T. T., Jensen, J. L., Primdahl, H., Aziz, N., Marcussen, N., Jensen, K. M.-E. & Ørntoft, T. F. (2005). A molecular signature in superficial bladder carcinoma predicts clinical outcome. Clinical Cancer Research, 11(11).

Jensen, J. L. & Hobolth, A. (2005). Applications of hidden Markov models for characterization of homologous DNA sequences with a common gene. Journal of Computational Biology, 12(2), 186-203.

Labouriau, R. (2005). Applying exponential dispersion models in finite mapping of QTL using combined linkage disequilibrium and linkage analysis for non-normal distributed traits. In Annals of Human Genetics 69 (pp. 764-774)

Østergaard, M., Labouriau, R., Dagiliene, E., Ernst, A., Krarup, H., Overvad, K., Autrup, H. & Andersen, V. (2005). A role of multiple drug resistance gene single nucleotide polymorphisms 2677 and 3435 in inflammatory bowel disease? In Proc. Gut, 54 (Suppl VII) (pp. 168)

Jensen, J. L., Lunter, G., Miklos, I., Drummond, A. & Hein, J. (2005). Bayesian coestimation of phylogeny and sequence alignment. BMC Bioinformatics, (6:83).

Jørgensen, F. G., Hobolth, A., Hornshøj, H., Bendixen, C., Fredholm, M. & Schierup, M. H. (2005). Comparative analysis of protein coding sequences from Human, Mouse and the domesticated Pig. BMC Biology, 3(2). https://doi.org/10.1186/1741-7007-3-2

Magnusson, N. E., Cardozo, AK., Kruhøffer, M., Eizirik, DL., Ørntoft, T. F. & Jensen, J. L. (2005). Construction and validation of the APOCHIP, a spotted oligo-microarray for the study of beta-cell apoptosis. BMC Bioinformatics, 6(1), 311.

Jensen, J. L. (2005). Context dependent DNA evolutionary models. Institut for Matematiske Fag, Aarhus Universitet. Research Report Vol. 458

Andersen, L. D., Andersen, C. L., Kruhøffer, M., Tørring, N., Koed, K., Wikman, F., Jensen, J. L. & Ørntoft, T. F. (2005). DNA microarrays and genetic testing. In In Molecular Diagnostics

Baudoin, F. & Nualart, D. (2005). Erratum: "Equivalence of Volterra processes" (Stochastic Process. Appl. (2003) vol. 107 (327-350) 10.1016/S0304-4149(03)00088-7). Stochastic Processes and Their Applications, 115(4), 701-703. https://doi.org/10.1016/j.spa.2004.11.002

Baudoin, F. & Coutin, L. (2005). Étude en temps petit des solutions d'EDS conduites par des mouvements browniens fractionnaires. Comptes Rendus Mathematique, 341(1), 39-42. https://doi.org/10.1016/j.crma.2005.05.010

Theil, P. K., Labouriau, R., Sejrsen, K., Thomsen, B. & Sørensen, M. T. (2005). Expression of genes involved in regulation of cell turnover during milk stasis and lactation rescue in sow mammary glands. Journal of Animal Science, 83, 2349-2356. http://jas.fass.org/cgi/content/abstract/83/10/2349?maxtoshow=&HITS=10&hits=10&RESULTFORMAT=&searchid=1&FIRSTINDEX=0&sortspec=relevance&volume=83&firstpage=2349&resourcetype=HWCIT

Laursen, T. M., Labouriau, R., Licht, R. W., Bertelsen, A., Munk-Olesen, T. & Mortensen, P. B. (2005). Family history of psychiatric ilness as a risk factor for schizoaffective disorder. Archives of general psychiatry, 62(8), 841-848. http://archpsyc.ama-assn.org/cgi/content/abstract/62/8/841

Elmholt, S. & Labouriau, R. (2005). Fungi in Danish soils under organic and conventional farming. Agriculture, Ecosystems and Environment, 107, 65-73.

Jónsdóttir, K. Ý. & Jensen, E. B. V. (2005). Gaussian radial growth. Image Anal. Stereol., 24, 117-126.

Theil, P. K., Sørensen, M. T., Labouriau, R., Thomsen, B. & Sejrsen, K. (2005). Gene expression in suckled and non-suckled mammary glands in early lactating sows. Livestock Science, 98(1-2), 190-191. https://doi.org/10.1016/j.livprodsci.2005.10.001

Kruhøffer, M., Jensen, J. L., Laiho, P., Andersen, L. D., Salovaara, R., Arango, D., Birkenkamp-Demtröder, K., Christensen, L. L., Sørensen, F. B., Buhl, L., Mecklin, J.-P., Järvinen, H., Andersen, T. T., Wikman, F., Bech-Knudsen, F., Juhola, M., Nupponen, M., Lauerberg, S., Andersen, C. L. ... Ørntoft, T. F. (2005). Gene expression signatures for colorectal cancer microsatellite status and HNPCC. British Journal of Cancer, 92(12).

Kötzer, S., Jensen, E. B. V. & Baddeley, A. (2005). Geometric identities in stereological particle analysis. Thiele Centre, Institut for Matematiske Fag, Aarhus Universitet.

Jensen, J. L. & Hein, J. (2005). Gibbs sampler for statistical multiple alignment. Statistica Sinica, 15(4), 889-907.

Asmussen, S., Kroese, D. P. & Rubinstein, R. Y. (2005). Heavy tails, importance sampling and cross-entropy. Stochastic Models, 21, 57-76.

Baudoin, F. & Teichmann, J. (2005). Hypoellipticity in infinite dimensions and an application in interest rate theory. Annals of Applied Probability, 15(3), 1765-1777. https://doi.org/10.1214/105051605000000214

Dalgaard, T. S., Vitved, L., Skjødt, K., Thomsen, B., Labouriau, R., Jensen, K. H. & Juul-Madsen, H. R. (2005). Molecular characterization of Major Histocompatibility Complex class I (B-F) mRNA variants from chickens differing in resistance to Marek's disease. Scandinavian Journal of Immunology, 62, 259-270. https://doi.org/10.1111/j.1365-3083.2005.01652.x

Asmussen, S. & Pihlsgård, M. (2005). Performance analysis with truncated heavy-tailed distributions. Methodology and Computing in Applied Probability, 7, 439-457.

Schjønning, P., Iversen, B. V., Munkholm, L. J., Labouriau, R. & Jacobsen, O. H. (2005). Pore characteristics and hydraulic properties of a sandy loam supplied for a century with either animal manure or mineral fertilizers. Soil Use and Management, 21(3), 265-275. https://doi.org/10.1111/j.1475-2743.2005.tb00398.x

Asmussen, S., Madan, D. & Pistorius, M. (2005). Pricing equity default swaps using the CGMY Levy process.

Christensen, O. F., Hobolth, A. & Jensen, J. L. (2005). Pseudo-likelihood analysis of codon substitution models with neighbor dependent rates. Journal of Computational Biology, 12, 1166-1182.

Lund, M. S., Sørensen, P. & Labouriau, R. (2005). QTL (fine) mapping using variance components models for multi-trait, longitudunal and non-normal data. In B. Freyer & K. Biebler (Eds.), Biometrie und Medizinsche Informatik Greifswalder Seminarbereichte (Vol. 10, pp. 1-16). Shaker Verlag.

Andersen, K., Cornuéjols, G. & Li, Y. (2005). Reduce-and-split cuts: Improving the performance of mixed integer Gomory cuts. Management Science, 51(11), 1720-1732. https://doi.org/10.1287/mnsc.1050.0382

Zieger, K., Andersen, L. D., Wiuf, C., Jensen, J. L., Andersen, C. L., Jensen, K. M.-E. & Ørntoft, T. F. (2005). Role of activating fibroblast growth factor receptor 3 mutations in the development of bladder tumors. Clinical Cancer Research, 11(21), 7709-7719.

Albrecher, H. & Asmussen, S. (2005). Ruin Probabilities and Aggregrate Claims Distributions for Shot Noise Cox Processes. Thiele Centre, Institut for Matematiske Fag, Aarhus Universitet.

Gardner, R. J., Hobolth, A., Jensen, E. B. V. & Sørensen, F. B. (2005). Shape discrimination by total curvature, with a view to cancer diagnostics. J. Microsc., 217, 49-59.

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Lars Madsen